Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_03975 | Not Available | Negative | 4304182 - 4307037 | 103000.0 |
| maltodextrin phosphorylase | AO275_03980 | Not Available | Negative | 4307267 - 4309717 | 91999.7 |
| proline iminopeptidase | AO275_03985 | Not Available | Positive | 4309999 - 4310970 | 36640.3 |
| d-tyrosyl-trna(tyr) deacylase | AO275_03990 | Not Available | Positive | 4311009 - 4311446 | 15291.5 |
| glucan biosynthesis protein g | AO275_03995 | Not Available | Positive | 4311710 - 4313653 | 71758.7 |
| glucosyltransferase mdoh | AO275_04000 | Not Available | Positive | 4313646 - 4316228 | 96726.0 |
| chemotaxis protein | AO275_04005 | Not Available | Negative | 4316414 - 4318357 | 69991.5 |
| chemotaxis protein | AO275_04010 | Not Available | Negative | 4318566 - 4320482 | 68420.1 |
| 16s rrna methyltransferase | AO275_04015 | Not Available | Negative | 4320577 - 4321284 | 26399.6 |
| twin-arginine protein translocation system subunit tatc | AO275_04020 | Not Available | Negative | 4321281 - 4322081 | 29840.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
