Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein | AO275_03925 | Not Available | Positive | 4289648 - 4291276 | 56110.5 |
| glutamate synthase | AO275_03930 | Not Available | Positive | 4291636 - 4296081 | 162496.0 |
| glutamate synthase | AO275_03935 | Not Available | Positive | 4296203 - 4297621 | 51730.9 |
| hypothetical protein | AO275_03940 | Not Available | Positive | 4298039 - 4298800 | 27491.8 |
| uroporphyrinogen decarboxylase | AO275_03945 | Not Available | Positive | 4298938 - 4300005 | 38854.8 |
| lipocalin | AO275_03950 | Not Available | Negative | 4300065 - 4300643 | 21833.0 |
| hypothetical protein | AO275_03955 | Not Available | Negative | 4300646 - 4300900 | 8920.81 |
| hypothetical protein | AO275_03960 | Not Available | Negative | 4301035 - 4301637 | 22983.4 |
| fructose 1,6-bisphosphatase | AO275_03965 | Not Available | Negative | 4301651 - 4302661 | 37259.5 |
| hypothetical protein | AO275_03970 | Not Available | Negative | 4302806 - 4304155 | 48785.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
