Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | AO275_03825 | Not Available | Positive | 4265616 - 4266653 | 38168.3 |
| amidase | AO275_03830 | Not Available | Negative | 4266801 - 4268600 | 65684.3 |
| nitrogen regulation protein nr(i) | AO275_03835 | Not Available | Negative | 4268710 - 4270146 | 53166.4 |
| histidine kinase | AO275_03840 | Not Available | Negative | 4270143 - 4271228 | 39986.6 |
| penicillin-binding protein | AO275_03845 | Not Available | Negative | 4271682 - 4272299 | 22741.7 |
| hypothetical protein | AO275_03850 | Not Available | Negative | 4272302 - 4272835 | 19545.3 |
| chorismate mutase | AO275_03855 | Not Available | Negative | 4272904 - 4273461 | 20332.4 |
| cupin | AO275_03860 | Not Available | Negative | 4273571 - 4273990 | 15151.4 |
| glutamine synthetase | AO275_03865 | Not Available | Negative | 4274174 - 4275580 | 51739.3 |
| trna s(4)u8 sulfurtransferase | AO275_03870 | Not Available | Positive | 4275915 - 4277369 | 54342.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
