Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | AO275_03725 | Not Available | Positive | 4239104 - 4240174 | 38525.6 |
| acr family transporter | AO275_03730 | Not Available | Positive | 4240171 - 4243275 | 113958.0 |
| methyltransferase | AO275_03735 | Not Available | Negative | 4243420 - 4244046 | 23654.8 |
| abc transporter permease | AO275_03740 | Not Available | Negative | 4244092 - 4244736 | 23069.1 |
| abc transporter | AO275_03745 | Not Available | Negative | 4244726 - 4245847 | 41209.0 |
| methionine abc transporter substrate-binding protein | AO275_03750 | Not Available | Negative | 4245844 - 4246632 | 28297.0 |
| n5,n10-methylene tetrahydromethanopterin reductase | AO275_03755 | Not Available | Negative | 4246934 - 4248310 | 51447.4 |
| sfnb family sulfur acquisition oxidoreductase | AO275_03760 | Not Available | Negative | 4248310 - 4249515 | 43629.3 |
| sfnb family sulfur acquisition oxidoreductase | AO275_03765 | Not Available | Negative | 4249541 - 4250806 | 45897.6 |
| hypothetical protein | AO275_03770 | Not Available | Negative | 4251169 - 4251897 | 26541.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
