Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter | AO275_03675 | Not Available | Negative | 4226442 - 4229540 | 107245.0 |
| taurine dioxygenase | AO275_03680 | Not Available | Positive | 4229800 - 4230696 | 33548.6 |
| sulfonate abc transporter atp-binding protein | AO275_03685 | Not Available | Positive | 4230710 - 4231591 | 32686.4 |
| abc transporter permease | AO275_03690 | Not Available | Positive | 4231674 - 4232540 | 31731.5 |
| sulfonate abc transporter substrate-binding protein | AO275_03695 | Not Available | Positive | 4232585 - 4233604 | 36760.8 |
| hypothetical protein | AO275_03700 | Not Available | Positive | 4234041 - 4234253 | 7585.95 |
| hypothetical protein | AO275_03705 | Not Available | Positive | 4234381 - 4235376 | 35160.9 |
| hypothetical protein | AO275_03710 | Not Available | Positive | 4235502 - 4236548 | 37165.3 |
| hypothetical protein | AO275_03715 | Not Available | Positive | 4236657 - 4237742 | 38216.2 |
| rnd transporter | AO275_03720 | Not Available | Positive | 4237989 - 4239107 | 39505.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
