Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_03575 | Not Available | Negative | 4205297 - 4206043 | 26961.0 |
| prolipoprotein diacylglyceryl transferase | AO275_03580 | Not Available | Positive | 4206169 - 4206981 | 30087.4 |
| thymidylate synthase | AO275_03585 | Not Available | Positive | 4207034 - 4208005 | 36705.9 |
| diguanylate cyclase | AO275_03590 | Not Available | Negative | 4208074 - 4209060 | 37073.8 |
| aminotransferase | AO275_03595 | Not Available | Negative | 4209198 - 4210382 | 45318.0 |
| diguanylate cyclase | AO275_03600 | Not Available | Positive | 4210540 - 4212471 | 70880.2 |
| hypothetical protein | AO275_03605 | Not Available | Positive | 4212674 - 4212856 | 6688.99 |
| abc transporter permease | AO275_03610 | Not Available | Positive | 4212987 - 4213997 | 36829.6 |
| sulfate abc transporter permease | AO275_03615 | Not Available | Positive | 4214095 - 4214916 | 29681.4 |
| sulfate abc transporter permease | AO275_03620 | Not Available | Positive | 4214927 - 4215799 | 31500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
