Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | AO275_02760 | Not Available | Positive | 4194802 - 4195203 | 15255.2 |
| transposase | AO275_02765 | Not Available | Positive | 4195227 - 4196024 | 30851.1 |
| hypothetical protein | AO275_02770 | Not Available | Negative | 4196107 - 4196631 | 19355.5 |
| hypothetical protein | AO275_02775 | Not Available | Negative | 4196628 - 4197149 | 19271.2 |
| hypothetical protein | AO275_02780 | Not Available | Negative | 4197146 - 4197808 | 23893.7 |
| ribonucleotide-diphosphate reductase subunit beta | AO275_02785 | Not Available | Positive | 4198670 - 4199917 | 47201.2 |
| hypothetical protein | AO275_03555 | Not Available | Positive | 4201090 - 4201518 | 15602.9 |
| phosphoserine phosphatase | AO275_03560 | Not Available | Negative | 4201528 - 4202184 | 24860.7 |
| rna pyrophosphohydrolase | AO275_03565 | Not Available | Positive | 4202327 - 4202806 | 18872.7 |
| phosphoenolpyruvate-protein phosphotransferase | AO275_03570 | Not Available | Positive | 4202828 - 4205107 | 83189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
