Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_02510 | Not Available | Negative | 4144608 - 4144730 | 4219.3 |
| mfs transporter | AO275_02515 | Not Available | Negative | 4144727 - 4145935 | 42467.2 |
| cobalamin synthase | AO275_02520 | Not Available | Negative | 4146041 - 4146772 | 25625.6 |
| alpha-ribazole phosphatase | AO275_02525 | Not Available | Negative | 4146774 - 4147346 | 20952.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | AO275_02530 | Not Available | Negative | 4147343 - 4148395 | 36186.6 |
| adenosylcobinamide kinase | AO275_02535 | Not Available | Negative | 4148392 - 4148913 | 18816.0 |
| cobyric acid synthase | AO275_02540 | Not Available | Negative | 4148915 - 4150375 | 52328.1 |
| threonine-phosphate decarboxylase | AO275_02545 | Not Available | Negative | 4150375 - 4151376 | 36924.2 |
| cobalamin biosynthesis protein cobd | AO275_02550 | Not Available | Negative | 4151369 - 4152277 | 32975.8 |
| 5,6-dimethylbenzimidazole synthase | AO275_02555 | Not Available | Negative | 4152274 - 4152924 | 24216.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
