Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h dehydrogenase | AO275_02460 | Not Available | Positive | 4135323 - 4135937 | 23053.8 |
| hypothetical protein | AO275_02465 | Not Available | Negative | 4135944 - 4136903 | 34718.1 |
| hypothetical protein | AO275_02470 | Not Available | Negative | 4137001 - 4137606 | 22068.8 |
| hypothetical protein | AO275_02475 | Not Available | Positive | 4137814 - 4138128 | 12109.4 |
| recombinase rmuc | AO275_02480 | Not Available | Negative | 4138518 - 4139996 | 55542.0 |
| hypothetical protein | AO275_02485 | Not Available | Positive | 4140663 - 4140968 | 10684.5 |
| hypothetical protein | AO275_02490 | Not Available | Positive | 4141452 - 4141676 | 8332.96 |
| hypothetical protein | AO275_02495 | Not Available | Positive | 4141953 - 4142432 | 17785.5 |
| long-chain fatty acid transport protein | AO275_02500 | Not Available | Positive | 4142592 - 4143866 | 45442.8 |
| glutathione peroxidase | AO275_02505 | Not Available | Negative | 4143995 - 4144546 | 20168.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
