Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | AO275_02410 | Not Available | Positive | 4123956 - 4124696 | 26355.5 |
| hypothetical protein | AO275_02415 | Not Available | Positive | 4124996 - 4125922 | 34415.6 |
| tena family transcriptional regulator | AO275_02420 | Not Available | Negative | 4125954 - 4126739 | 29948.7 |
| hypothetical protein | AO275_02425 | Not Available | Negative | 4126770 - 4129232 | 90827.3 |
| abc transporter atp-binding protein | AO275_02430 | Not Available | Negative | 4129356 - 4131182 | 66782.9 |
| disulfide bond formation protein dsba | AO275_02435 | Not Available | Negative | 4131175 - 4131807 | 22984.2 |
| hypothetical protein | AO275_02440 | Not Available | Negative | 4131811 - 4132746 | 35179.5 |
| bola family transcriptional regulator | AO275_02445 | Not Available | Negative | 4132933 - 4133226 | 10687.8 |
| hypothetical protein | AO275_02450 | Not Available | Negative | 4133239 - 4133766 | 18807.9 |
| fumarate hydratase | AO275_02455 | Not Available | Positive | 4133936 - 4135330 | 49101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
