Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | AO275_02360 | Not Available | Negative | 4110270 - 4111955 | 61976.6 |
| cytidylate kinase | AO275_02365 | Not Available | Negative | 4112078 - 4112767 | 24599.3 |
| prephenate dehydrogenase | AO275_02370 | Not Available | Negative | 4112764 - 4114368 | 56523.2 |
| prephenate dehydratase | AO275_02375 | Not Available | Negative | 4114444 - 4115538 | 40310.4 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | AO275_02380 | Not Available | Negative | 4115538 - 4116623 | 39735.4 |
| dna gyrase subunit a | AO275_02385 | Not Available | Negative | 4116834 - 4119620 | 102455.0 |
| methylthioribose-1-phosphate isomerase | AO275_02390 | Not Available | Negative | 4119925 - 4121001 | 38856.7 |
| n-ethylammeline chlorohydrolase | AO275_02395 | Not Available | Positive | 4121120 - 4122472 | 48803.6 |
| 3-demethylubiquinone-9 3-methyltransferase | AO275_02400 | Not Available | Positive | 4122555 - 4123253 | 25963.3 |
| phosphoglycolate phosphatase | AO275_02405 | Not Available | Positive | 4123257 - 4123928 | 24597.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
