Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_02310 | Not Available | Positive | 4100077 - 4100283 | 7962.46 |
| serine/threonine protein kinase | AO275_02315 | Not Available | Negative | 4100527 - 4101804 | 45989.6 |
| tetr family transcriptional regulator | AO275_02320 | Not Available | Positive | 4102121 - 4102741 | 22795.2 |
| competence protein comea | AO275_02325 | Not Available | Negative | 4102797 - 4103129 | 11737.9 |
| hypothetical protein | AO275_02330 | Not Available | Negative | 4103289 - 4105283 | 73623.4 |
| glycosyl transferase | AO275_02335 | Not Available | Negative | 4105382 - 4106398 | 36001.9 |
| nad-dependent dehydratase | AO275_02340 | Not Available | Negative | 4106391 - 4107368 | 35468.9 |
| mbl fold metallo-hydrolase | AO275_02345 | Not Available | Negative | 4107581 - 4109002 | 51867.3 |
| hypothetical protein | AO275_02350 | Not Available | Negative | 4109404 - 4109652 | 9073.76 |
| integration host factor subunit beta | AO275_02355 | Not Available | Negative | 4109677 - 4109973 | 11042.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
