Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenoprotein | AO275_02060 | Not Available | Negative | 4048473 - 4048775 | 11169.3 |
| sulfonate abc transporter atp-binding protein | AO275_02065 | Not Available | Negative | 4048827 - 4049660 | 30335.7 |
| abc transporter permease | AO275_02070 | Not Available | Negative | 4049663 - 4050517 | 30992.7 |
| alkanesulfonate monooxygenase | AO275_02075 | Not Available | Positive | 4050776 - 4051864 | 39854.8 |
| lysr family transcriptional regulator | AO275_02080 | Not Available | Negative | 4051915 - 4052820 | 32737.9 |
| cysteine dioxygenase | AO275_02085 | Not Available | Positive | 4053027 - 4053632 | 22128.0 |
| sulfurtransferase | AO275_02090 | Not Available | Positive | 4053632 - 4055215 | 57715.0 |
| abc transporter substrate-binding protein | AO275_02095 | Not Available | Positive | 4055377 - 4056366 | 35002.1 |
| acyl-coa dehydrogenase | AO275_02100 | Not Available | Positive | 4056407 - 4057582 | 42323.2 |
| biotin transporter bioy | AO275_02105 | Not Available | Negative | 4057583 - 4059853 | 83267.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
