Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | AO275_16870 | Not Available | Negative | 281844 - 283064 | 45252.1 |
| binary cytotoxin component | AO275_16875 | Not Available | Positive | 283341 - 284546 | 45298.8 |
| toxin | AO275_16880 | Not Available | Positive | 284557 - 285573 | 37956.2 |
| hypothetical protein | AO275_16885 | Not Available | Negative | 285628 - 286245 | 23000.0 |
| methanol dehydrogenase | AO275_16890 | Not Available | Negative | 286274 - 286966 | 24609.8 |
| beta-d-glucoside glucohydrolase | AO275_16895 | Not Available | Positive | 287287 - 289611 | 83964.7 |
| cytochrome c biogenesis protein ccme | AO275_16900 | Not Available | Positive | 289688 - 291445 | 65441.8 |
| c4-dicarboxylate abc transporter | AO275_16905 | Not Available | Positive | 291452 - 292786 | 49565.9 |
| histidine kinase | AO275_16910 | Not Available | Positive | 293120 - 295387 | 83002.9 |
| mfs transporter | AO275_16915 | Not Available | Positive | 295616 - 296941 | 48288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
