Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein cina | AO275_01755 | Not Available | Negative | 3989722 - 3991026 | 45983.6 |
| sodium:dicarboxylate symporter | AO275_01760 | Not Available | Negative | 3991143 - 3992447 | 46463.3 |
| isomerase | AO275_01765 | Not Available | Negative | 3992506 - 3993588 | 37440.1 |
| lysr family transcriptional regulator | AO275_01770 | Not Available | Positive | 3993756 - 3994646 | 33271.5 |
| hypothetical protein | AO275_01775 | Not Available | Negative | 3994692 - 3995807 | 40601.4 |
| histidine kinase | AO275_01780 | Not Available | Positive | 3996073 - 3998139 | 75152.6 |
| hypothetical protein | AO275_01785 | Not Available | Negative | 3998118 - 3998414 | 11169.3 |
| short-chain dehydrogenase | AO275_01790 | Not Available | Negative | 3998462 - 3999268 | 29698.2 |
| arac family transcriptional regulator | AO275_01795 | Not Available | Positive | 3999544 - 4000626 | 40662.9 |
| hypothetical protein | AO275_01800 | Not Available | Positive | 4001159 - 4001410 | 8694.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
