Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | AO275_01655 | Not Available | Negative | 3965996 - 3967282 | 45517.9 |
| aldehyde dehydrogenase | AO275_01660 | Not Available | Negative | 3967307 - 3968797 | 53332.6 |
| 4-aminobutyrate aminotransferase | AO275_01665 | Not Available | Positive | 3969045 - 3970292 | 44397.7 |
| hypothetical protein | AO275_01670 | Not Available | Positive | 3970338 - 3971750 | 52267.7 |
| branched-chain amino acid abc transporter permease | AO275_01675 | Not Available | Positive | 3972171 - 3973499 | 46299.8 |
| lysr family transcriptional regulator | AO275_01680 | Not Available | Negative | 3973641 - 3974546 | 33892.9 |
| serine dehydratase | AO275_01685 | Not Available | Positive | 3974674 - 3976050 | 49043.9 |
| peptidase m20 | AO275_01690 | Not Available | Negative | 3976188 - 3977345 | 41506.9 |
| aldehyde dehydrogenase | AO275_01695 | Not Available | Negative | 3977351 - 3978868 | 54079.3 |
| 3-hydroxyisobutyrate dehydrogenase | AO275_01700 | Not Available | Negative | 3978872 - 3979762 | 30348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
