Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme oxygenase | AO275_01605 | Not Available | Negative | 3956790 - 3957404 | 22591.3 |
| cation transporter | AO275_01610 | Not Available | Negative | 3957600 - 3958547 | 33542.4 |
| transcriptional regulator | AO275_01615 | Not Available | Negative | 3958573 - 3958848 | 10142.2 |
| sulfatase | AO275_01620 | Not Available | Negative | 3958945 - 3960978 | 76029.6 |
| hypothetical protein | AO275_01625 | Not Available | Negative | 3960989 - 3961609 | 22603.5 |
| hypothetical protein | AO275_01630 | Not Available | Negative | 3961606 - 3962904 | 47458.9 |
| cytochrome b | AO275_01635 | Not Available | Negative | 3962972 - 3963517 | 20660.3 |
| hypothetical protein | AO275_01640 | Not Available | Negative | 3963517 - 3963783 | 9961.07 |
| xre family transcriptional regulator | AO275_01645 | Not Available | Positive | 3963954 - 3964616 | 24784.2 |
| histidine kinase | AO275_01650 | Not Available | Positive | 3964613 - 3965986 | 50765.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
