Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | AO275_01550 | Not Available | Negative | 3940701 - 3941570 | 33017.6 |
| 4-hydroxybenzoate 3-monooxygenase | AO275_01555 | Not Available | Positive | 3941722 - 3942906 | 44267.9 |
| mfs transporter permease | AO275_01560 | Not Available | Positive | 3943106 - 3944431 | 48304.2 |
| hypothetical protein | AO275_01565 | Not Available | Positive | 3944599 - 3944949 | 12837.3 |
| hypothetical protein | AO275_01570 | Not Available | Positive | 3944949 - 3945443 | 17842.4 |
| type iv secretion protein rhs | AO275_01575 | Not Available | Positive | 3945735 - 3947810 | 77257.4 |
| hypothetical protein | AO275_01585 | Not Available | Positive | 3948601 - 3952383 | 138463.0 |
| hypothetical protein | AO275_01590 | Not Available | Positive | 3952532 - 3953434 | 36342.5 |
| hypothetical protein | AO275_01595 | Not Available | Positive | 3953600 - 3954502 | 35988.2 |
| histidine kinase | AO275_01600 | Not Available | Negative | 3954556 - 3956793 | 82340.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
