Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flgb | AO275_01450 | Not Available | Negative | 3918562 - 3918969 | 14798.2 |
| chemotaxis protein | AO275_01455 | Not Available | Negative | 3919398 - 3920225 | 30891.3 |
| chemotaxis protein chew | AO275_01460 | Not Available | Negative | 3920288 - 3921214 | 34218.9 |
| flagellar biosynthesis protein flga | AO275_01465 | Not Available | Positive | 3921293 - 3922051 | 27913.2 |
| flagellar biosynthesis anti-sigma factor flgm | AO275_01470 | Not Available | Positive | 3922211 - 3922519 | 10838.7 |
| flagellar biosynthesis protein flgn | AO275_01475 | Not Available | Positive | 3922569 - 3923036 | 17037.4 |
| pilus assembly protein pilz | AO275_01480 | Not Available | Positive | 3923119 - 3923865 | 28563.0 |
| mfs transporter | AO275_01485 | Not Available | Negative | 3923967 - 3925358 | 50069.4 |
| glutamate--ammonia ligase | AO275_01490 | Not Available | Negative | 3925412 - 3926755 | 48647.4 |
| aminotransferase | AO275_01495 | Not Available | Positive | 3927036 - 3928154 | 41747.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
