Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flgk | AO275_01400 | Not Available | Negative | 3908683 - 3910743 | 70459.8 |
| flagellar biosynthesis protein flgj | AO275_01405 | Not Available | Negative | 3910754 - 3911995 | 44140.1 |
| flagellar biosynthesis protein flgi | AO275_01410 | Not Available | Negative | 3912006 - 3913115 | 38035.9 |
| flagellar basal body l-ring protein | AO275_01415 | Not Available | Negative | 3913129 - 3913845 | 24792.3 |
| flagellar basal-body rod protein flgg | AO275_01420 | Not Available | Negative | 3913927 - 3914715 | 27465.2 |
| flagellar biosynthesis protein flgf | AO275_01425 | Not Available | Negative | 3914762 - 3915502 | 26120.1 |
| hypothetical protein | AO275_01430 | Not Available | Positive | 3915785 - 3915976 | 6859.27 |
| flagellar biosynthesis protein flge | AO275_01435 | Not Available | Negative | 3916068 - 3917396 | 45903.9 |
| flagellar biosynthesis protein flgd | AO275_01440 | Not Available | Negative | 3917425 - 3918102 | 23025.8 |
| flagellar basal-body rod protein flgc | AO275_01445 | Not Available | Negative | 3918118 - 3918558 | 15606.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
