Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | AO275_01350 | Not Available | Negative | 3893453 - 3894928 | 55453.9 |
| flagellar assembly protein flit | AO275_01355 | Not Available | Negative | 3895107 - 3895403 | 11000.1 |
| flagellar export chaperone flis | AO275_01360 | Not Available | Negative | 3895432 - 3895827 | 14456.6 |
| flagellar hook protein flid | AO275_01365 | Not Available | Negative | 3895958 - 3897418 | 49160.1 |
| flagellar biosynthesis protein flag | AO275_01370 | Not Available | Negative | 3897498 - 3897890 | 14003.5 |
| flagellin | AO275_01375 | Not Available | Negative | 3897963 - 3898811 | 29177.1 |
| beta-ketoacyl-acp synthase | AO275_01380 | Not Available | Negative | 3899132 - 3900058 | 32871.1 |
| glycosyl transferase family 2 | AO275_01385 | Not Available | Negative | 3900355 - 3903258 | 106502.0 |
| glycosyl transferase family 2 | AO275_01390 | Not Available | Negative | 3903407 - 3906988 | 133868.0 |
| flagellar biosynthesis protein flgl | AO275_01395 | Not Available | Negative | 3907077 - 3908669 | 54991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
