Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chey | AO275_01300 | Not Available | Negative | 3882589 - 3884286 | 61708.6 |
| anti-anti-sigma factor | AO275_01305 | Not Available | Negative | 3884290 - 3884592 | 11098.2 |
| flagellar biogenesis protein | AO275_01310 | Not Available | Negative | 3884674 - 3885123 | 17455.6 |
| flagellar protein export atpase flii | AO275_01315 | Not Available | Negative | 3885130 - 3886488 | 48357.8 |
| flagellar assembly protein flih | AO275_01320 | Not Available | Negative | 3886478 - 3887296 | 30074.5 |
| flagellar motor switch protein flig | AO275_01325 | Not Available | Negative | 3887312 - 3888328 | 36960.7 |
| flagellar m-ring protein flif | AO275_01330 | Not Available | Negative | 3888321 - 3890102 | 63098.9 |
| flagellar hook-basal body protein flie | AO275_01335 | Not Available | Negative | 3890118 - 3890447 | 11674.1 |
| fis family transcriptional regulator | AO275_01340 | Not Available | Negative | 3890701 - 3892116 | 50895.7 |
| histidine kinase | AO275_01345 | Not Available | Negative | 3892116 - 3893330 | 43934.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
