Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthetic protein flhb | AO275_01250 | Not Available | Negative | 3874916 - 3876052 | 41815.7 |
| flagellar biosynthetic protein flir | AO275_01255 | Not Available | Negative | 3876054 - 3876839 | 28144.0 |
| flagellar biosynthetic protein fliq | AO275_01260 | Not Available | Negative | 3876846 - 3877115 | 9940.87 |
| flagellar biosynthesis protein flip | AO275_01265 | Not Available | Negative | 3877141 - 3877893 | 27213.7 |
| flagellar assembly protein flio | AO275_01270 | Not Available | Negative | 3877893 - 3878330 | 15603.7 |
| flagellar motor switch protein | AO275_01275 | Not Available | Negative | 3878331 - 3878792 | 16170.1 |
| flagellar motor switch protein flim | AO275_01280 | Not Available | Negative | 3878855 - 3879823 | 35948.6 |
| flagellar basal body protein flil | AO275_01285 | Not Available | Negative | 3879833 - 3880333 | 17818.1 |
| flagellar hook-length control protein | AO275_01290 | Not Available | Negative | 3880662 - 3882086 | 48298.2 |
| histidine kinase | AO275_01295 | Not Available | Negative | 3882189 - 3882545 | 13686.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
