Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_01100 | Not Available | Positive | 3844659 - 3846566 | 67505.8 |
| hypothetical protein | AO275_01105 | Not Available | Positive | 3846680 - 3847138 | 17225.7 |
| esterase | AO275_01110 | Not Available | Negative | 3847140 - 3847820 | 24893.9 |
| cytochrome c oxidase cbb3 | AO275_01115 | Not Available | Positive | 3848096 - 3849538 | 53734.0 |
| cytochrome c oxidase cbb3 | AO275_01120 | Not Available | Positive | 3849538 - 3850146 | 22344.0 |
| cytochrome oxidase | AO275_01125 | Not Available | Positive | 3850152 - 3850343 | 6923.53 |
| cytochrome c oxidase cbb3 | AO275_01130 | Not Available | Positive | 3850340 - 3851317 | 35598.3 |
| (fe-s)-binding protein | AO275_01135 | Not Available | Positive | 3851382 - 3852797 | 53528.9 |
| hypothetical protein | AO275_01140 | Not Available | Positive | 3852808 - 3853347 | 20024.8 |
| carbonate dehydratase | AO275_01145 | Not Available | Positive | 3853349 - 3855802 | 88218.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
