Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific | AO275_00950 | Not Available | Negative | 3812549 - 3813457 | 33947.1 |
| isochorismatase | AO275_00955 | Not Available | Positive | 3813717 - 3814307 | 21026.5 |
| hypothetical protein | AO275_00960 | Not Available | Positive | 3814444 - 3814764 | 11342.0 |
| dna mismatch repair protein muts | AO275_00965 | Not Available | Positive | 3814810 - 3815367 | 20941.3 |
| gtp cyclohydrolase | AO275_00970 | Not Available | Positive | 3815980 - 3816525 | 20070.7 |
| glutaredoxin | AO275_00975 | Not Available | Positive | 3816595 - 3816966 | 14007.2 |
| hypothetical protein | AO275_00980 | Not Available | Negative | 3816986 - 3817372 | 14226.2 |
| glutathione s-transferase | AO275_00985 | Not Available | Negative | 3817441 - 3818043 | 22900.4 |
| gntr family transcriptional regulator | AO275_00990 | Not Available | Negative | 3818089 - 3819255 | 43101.6 |
| marr family transcriptional regulator | AO275_00995 | Not Available | Positive | 3819337 - 3819807 | 17721.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
