Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_00900 | Not Available | Negative | 3803991 - 3804530 | 19095.9 |
| hypothetical protein | AO275_00905 | Not Available | Positive | 3804864 - 3805142 | 10518.5 |
| luxr family transcriptional regulator | AO275_00910 | Not Available | Negative | 3805254 - 3805976 | 27235.8 |
| haloacid dehalogenase | AO275_00915 | Not Available | Negative | 3806179 - 3806865 | 24689.1 |
| acireductone dioxygenase | AO275_00920 | Not Available | Negative | 3806913 - 3807458 | 20334.8 |
| methylthioribulose-1-phosphate dehydratase | AO275_00925 | Not Available | Negative | 3807545 - 3808159 | 22703.0 |
| mfs transporter | AO275_00930 | Not Available | Negative | 3808156 - 3809337 | 43356.0 |
| chorismate synthase | AO275_00935 | Not Available | Negative | 3809350 - 3810441 | 38951.5 |
| alpha/beta hydrolase | AO275_00940 | Not Available | Positive | 3810584 - 3811591 | 36260.2 |
| hypothetical protein | AO275_00945 | Not Available | Positive | 3811730 - 3812515 | 30010.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
