Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase | AO275_00850 | Not Available | Negative | 3793904 - 3794734 | 30686.2 |
| hypothetical protein | AO275_00855 | Not Available | Negative | 3794731 - 3795690 | 36093.2 |
| hypothetical protein | AO275_00860 | Not Available | Negative | 3795703 - 3797112 | 52538.2 |
| superfamily ii dna/rna helicase, snf2 family protein | AO275_00865 | Not Available | Negative | 3797643 - 3797984 | 13063.3 |
| hypothetical protein | AO275_00870 | Not Available | Negative | 3798224 - 3798460 | 9224.74 |
| hypothetical protein | AO275_00875 | Not Available | Negative | 3798671 - 3800764 | 77812.8 |
| spermidine synthase | AO275_00880 | Not Available | Negative | 3801033 - 3801893 | 31987.3 |
| hypothetical protein | AO275_00885 | Not Available | Negative | 3802092 - 3802283 | 6675.69 |
| hypothetical protein | AO275_00890 | Not Available | Positive | 3802448 - 3803374 | 31822.4 |
| hypothetical protein | AO275_00895 | Not Available | Negative | 3803371 - 3803889 | 18681.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
