Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_00800 | Not Available | Negative | 3786804 - 3787970 | 42827.5 |
| cytochrome c | AO275_00805 | Not Available | Positive | 3788128 - 3788496 | 13240.9 |
| hypothetical protein | AO275_00810 | Not Available | Negative | 3788554 - 3788718 | 5889.44 |
| iron abc transporter substrate-binding protein | AO275_00815 | Not Available | Positive | 3788868 - 3789275 | 14380.1 |
| ethyl tert-butyl ether degradation protein ethd | AO275_00820 | Not Available | Negative | 3789279 - 3789593 | 11739.0 |
| hypothetical protein | AO275_00825 | Not Available | Positive | 3789766 - 3790059 | 11129.9 |
| enoyl-coa hydratase | AO275_00830 | Not Available | Positive | 3790159 - 3790848 | 24475.6 |
| magnesium transporter | AO275_00835 | Not Available | Positive | 3790974 - 3791945 | 36443.1 |
| amidotransferase | AO275_00840 | Not Available | Negative | 3792028 - 3792756 | 27222.6 |
| sulfurtransferase | AO275_00845 | Not Available | Positive | 3793442 - 3793816 | 13526.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
