Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase | AO275_00750 | Not Available | Negative | 3772238 - 3773701 | 53290.7 |
| transcription-repair coupling factor | AO275_00755 | Not Available | Positive | 3773891 - 3777343 | 128959.0 |
| hypothetical protein | AO275_00760 | Not Available | Positive | 3777355 - 3777879 | 19016.8 |
| helicase | AO275_00765 | Not Available | Positive | 3777955 - 3780699 | 103939.0 |
| outer membrane assembly lipoprotein yfio | AO275_00770 | Not Available | Positive | 3780765 - 3782960 | 81077.4 |
| hypothetical protein | AO275_00775 | Not Available | Positive | 3782960 - 3783691 | 27882.5 |
| isochorismatase | AO275_00780 | Not Available | Negative | 3783682 - 3784239 | 20497.0 |
| oxidoreductase | AO275_00785 | Not Available | Positive | 3784387 - 3785136 | 25604.5 |
| Trna-ser | Not Available | Not Available | Positive | 3785337 - 3785426 | Not Available |
| hypothetical protein | AO275_00795 | Not Available | Positive | 3785956 - 3786657 | 24842.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
