Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | AO275_00700 | Not Available | Negative | 3761271 - 3761969 | 25074.4 |
| cell division protein ftsx | AO275_00705 | Not Available | Negative | 3761962 - 3763212 | 45611.3 |
| pilus assembly protein pilz | AO275_00710 | Not Available | Positive | 3763315 - 3763902 | 21857.9 |
| glycerophosphodiester phosphodiesterase | AO275_00715 | Not Available | Positive | 3763958 - 3764680 | 26939.3 |
| pyridine nucleotide-disulfide oxidoreductase | AO275_00720 | Not Available | Negative | 3764723 - 3766117 | 50677.4 |
| thiamine biosynthesis protein apbe | AO275_00725 | Not Available | Negative | 3766253 - 3767230 | 36319.1 |
| citrate-proton symporter | AO275_00730 | Not Available | Positive | 3767753 - 3769045 | 45939.8 |
| hypothetical protein | AO275_00735 | Not Available | Negative | 3769158 - 3769415 | 9711.42 |
| histidine kinase | AO275_00740 | Not Available | Negative | 3769511 - 3770671 | 41186.1 |
| mfs transporter | AO275_00745 | Not Available | Negative | 3770800 - 3772065 | 45375.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
