Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligand-gated channel | AO275_00650 | Not Available | Positive | 3751199 - 3753370 | 79324.9 |
| transaldolase | AO275_00655 | Not Available | Positive | 3753630 - 3754565 | 33834.0 |
| anti-anti-sigma factor | AO275_00660 | Not Available | Negative | 3754646 - 3755131 | 17899.7 |
| chemotaxis protein chey | AO275_00665 | Not Available | Negative | 3755131 - 3756312 | 43137.2 |
| pilus assembly protein | AO275_00670 | Not Available | Positive | 3756579 - 3756878 | 10849.8 |
| hypothetical protein | AO275_00675 | Not Available | Negative | 3756957 - 3757658 | 25545.4 |
| phosphatase | AO275_00680 | Not Available | Positive | 3757850 - 3758461 | 21569.0 |
| chromosome partitioning protein para | AO275_00685 | Not Available | Positive | 3758565 - 3758831 | 9863.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | AO275_00690 | Not Available | Negative | 3758891 - 3759721 | 30952.7 |
| multidrug abc transporter substrate-binding protein | AO275_00695 | Not Available | Negative | 3759964 - 3761208 | 44486.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
