Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | AO275_10960 | Not Available | Negative | 3729582 - 3729920 | 12330.9 |
| hypothetical protein | AO275_10965 | Not Available | Positive | 3730340 - 3730606 | 9799.73 |
| arac family transcriptional regulator | AO275_10970 | Not Available | Negative | 3730617 - 3731558 | 35061.3 |
| l-fucose dehydrogenase | AO275_10975 | Not Available | Positive | 3731733 - 3732905 | 42219.4 |
| hypothetical protein | AO275_10980 | Not Available | Positive | 3733219 - 3733842 | 22201.6 |
| caax protease | AO275_10985 | Not Available | Negative | 3734200 - 3735123 | 34861.8 |
| hypothetical protein | AO275_10995 | Not Available | Negative | 3737228 - 3737446 | 8123.63 |
| abc transporter atp-binding protein | AO275_11000 | Not Available | Positive | 3737834 - 3738514 | 24541.6 |
| hypothetical protein | AO275_11005 | Not Available | Positive | 3738588 - 3739361 | 27828.7 |
| hypothetical protein | AO275_11010 | Not Available | Positive | 3740091 - 3740669 | 20974.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
