Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron donor protein cyay | AO275_10910 | Not Available | Negative | 3721887 - 3722219 | 12536.4 |
| hypothetical protein | AO275_10915 | Not Available | Positive | 3722458 - 3722607 | 5217.34 |
| diaminopimelate decarboxylase | AO275_10920 | Not Available | Positive | 3722617 - 3723864 | 45386.2 |
| diaminopimelate epimerase | AO275_10925 | Not Available | Positive | 3723869 - 3724699 | 30202.4 |
| hypothetical protein | AO275_10930 | Not Available | Positive | 3724713 - 3725447 | 27019.4 |
| recombinase xerc | AO275_10935 | Not Available | Positive | 3725450 - 3726349 | 33801.3 |
| had family hydrolase | AO275_10940 | Not Available | Positive | 3726342 - 3727034 | 25512.1 |
| hypothetical protein | AO275_10945 | Not Available | Negative | 3727113 - 3727442 | 11565.0 |
| hypothetical protein | AO275_10950 | Not Available | Negative | 3727542 - 3727967 | 15660.7 |
| ammonia channel protein | AO275_10955 | Not Available | Negative | 3728210 - 3729547 | 45955.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
