Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid kinase | AO275_16720 | Not Available | Positive | 246126 - 246941 | 29958.0 |
| lauroyl acyltransferase | AO275_16725 | Not Available | Positive | 246938 - 247720 | 28984.1 |
| urea carboxylase | AO275_16730 | Not Available | Positive | 247717 - 248442 | 26580.7 |
| urea carboxylase | AO275_16735 | Not Available | Positive | 248455 - 249078 | 22979.2 |
| hypothetical protein | AO275_16740 | Not Available | Positive | 249198 - 252869 | 132028.0 |
| allophanate hydrolase | AO275_16745 | Not Available | Positive | 252900 - 254708 | 64042.5 |
| hypothetical protein | AO275_16750 | Not Available | Positive | 254938 - 258294 | 125559.0 |
| helicase | AO275_16755 | Not Available | Positive | 258320 - 258544 | 7844.34 |
| 16s rrna pseudouridine(516) synthase | AO275_16760 | Not Available | Positive | 258590 - 259282 | 26594.1 |
| mfs transporter | AO275_16765 | Not Available | Positive | 259582 - 260475 | 33547.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
