Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen deaminase | AO275_10860 | Not Available | Negative | 3711574 - 3712515 | 33534.5 |
| chemotaxis protein chey | AO275_10865 | Not Available | Negative | 3712743 - 3713489 | 27814.9 |
| alginate o-acetyltransferase | AO275_10870 | Not Available | Negative | 3713486 - 3714568 | 40163.6 |
| argininosuccinate lyase | AO275_10875 | Not Available | Positive | 3714703 - 3716097 | 51722.9 |
| glutathione s-transferase | AO275_10880 | Not Available | Negative | 3716319 - 3716993 | 24793.2 |
| hypothetical protein | AO275_10885 | Not Available | Positive | 3717176 - 3717457 | 10494.3 |
| dna-binding protein | AO275_10890 | Not Available | Positive | 3717675 - 3717923 | 8689.45 |
| adenylate cyclase | AO275_10895 | Not Available | Positive | 3718110 - 3720956 | 108921.0 |
| nucleoside diphosphate kinase regulator | AO275_10900 | Not Available | Negative | 3721090 - 3721497 | 14506.1 |
| dna mismatch repair protein mutt | AO275_10905 | Not Available | Negative | 3721636 - 3721884 | 9305.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
