Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AO275_10810 | Not Available | Negative | 3702616 - 3704526 | 70935.6 |
| hypothetical protein | AO275_10815 | Not Available | Positive | 3704573 - 3705043 | 17288.6 |
| transcriptional regulator | AO275_10820 | Not Available | Negative | 3705040 - 3706017 | 31914.9 |
| hypothetical protein | AO275_10825 | Not Available | Positive | 3706016 - 3706204 | 6777.28 |
| peptidylprolyl isomerase | AO275_10830 | Not Available | Positive | 3706234 - 3706908 | 24281.0 |
| transcriptional regulator | AO275_10835 | Not Available | Negative | 3706984 - 3707457 | 17578.6 |
| acetyltransferase | AO275_10840 | Not Available | Negative | 3707633 - 3708160 | 18615.0 |
| heme biosynthesis protein hemy | AO275_10845 | Not Available | Negative | 3708387 - 3709631 | 46716.3 |
| heme biosynthesis operon protein hemx | AO275_10850 | Not Available | Negative | 3709628 - 3710749 | 40754.9 |
| uroporphyrinogen-iii synthase | AO275_10855 | Not Available | Negative | 3710801 - 3711577 | 28018.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
