Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| delta-aminolevulinic acid dehydratase | AO275_10760 | Not Available | Negative | 3693001 - 3694011 | 36861.1 |
| hypothetical protein | AO275_10765 | Not Available | Positive | 3694242 - 3694901 | 24535.4 |
| isoprenoid biosynthesis protein | AO275_10770 | Not Available | Positive | 3695055 - 3695723 | 23438.0 |
| cystathionine gamma-synthase | AO275_10775 | Not Available | Negative | 3695877 - 3697787 | 67577.1 |
| hypothetical protein | AO275_10780 | Not Available | Positive | 3698137 - 3699534 | 51080.9 |
| hypothetical protein | AO275_10785 | Not Available | Positive | 3699548 - 3699919 | 13255.2 |
| penicillin-binding protein activator lpob | AO275_10790 | Not Available | Positive | 3699958 - 3700545 | 21686.8 |
| penicillin-binding protein activator lpob | AO275_10795 | Not Available | Positive | 3700549 - 3701289 | 27312.1 |
| threonine transporter rhtb | AO275_10800 | Not Available | Negative | 3701329 - 3701955 | 22480.2 |
| hypothetical protein | AO275_10805 | Not Available | Negative | 3702023 - 3702616 | 21496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
