Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_10660 | Not Available | Positive | 3674215 - 3674424 | 8113.84 |
| cell division protein zapa | AO275_10665 | Not Available | Positive | 3674421 - 3674750 | 11893.1 |
| 5-formyltetrahydrofolate cyclo-ligase | AO275_10670 | Not Available | Positive | 3675063 - 3675674 | 23707.0 |
| hypothetical protein | AO275_10675 | Not Available | Negative | 3675740 - 3675892 | 5626.01 |
| hypothetical protein | AO275_10680 | Not Available | Positive | 3676078 - 3676527 | 16756.8 |
| flagellar basal body protein flil | AO275_10685 | Not Available | Negative | 3676534 - 3676938 | 14802.9 |
| nadph:quinone oxidoreductase | AO275_10690 | Not Available | Positive | 3677081 - 3678058 | 34378.6 |
| glycerol-3-phosphate transporter | AO275_10695 | Not Available | Positive | 3678570 - 3679919 | 49846.1 |
| calcium transporter chac | AO275_10700 | Not Available | Negative | 3679921 - 3680589 | 24962.8 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | AO275_10705 | Not Available | Negative | 3680798 - 3681766 | 35454.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
