Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | AO275_10510 | Not Available | Positive | 3641954 - 3642667 | 25397.1 |
| hypothetical protein | AO275_10515 | Not Available | Positive | 3643034 - 3643222 | 6977.49 |
| hypothetical protein | AO275_10520 | Not Available | Positive | 3643389 - 3644099 | 26033.1 |
| gnat family acetyltransferase | AO275_10525 | Not Available | Negative | 3644075 - 3644575 | 18540.2 |
| phosphoenolpyruvate carboxykinase | AO275_10530 | Not Available | Negative | 3644705 - 3646246 | 55720.8 |
| molecular chaperone hsp33 | AO275_10535 | Not Available | Negative | 3646426 - 3647328 | 33253.5 |
| rna-binding protein | AO275_10540 | Not Available | Negative | 3647503 - 3647910 | 15493.5 |
| diguanylate phosphodiesterase | AO275_10545 | Not Available | Positive | 3648090 - 3648872 | 29167.7 |
| ribosomal protein s6 modification protein | AO275_10550 | Not Available | Positive | 3648889 - 3649365 | 17432.2 |
| ribosomal protein s6 modification protein | AO275_10555 | Not Available | Positive | 3649362 - 3650267 | 32681.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
