Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | AO275_16670 | Not Available | Negative | 235260 - 236651 | 50919.3 |
| transcriptional regulator | AO275_16675 | Not Available | Negative | 236644 - 237315 | 24614.8 |
| tricarboxylic transporter | AO275_16680 | Not Available | Positive | 237804 - 238781 | 35138.5 |
| hypothetical protein | AO275_16685 | Not Available | Positive | 238844 - 239302 | 16650.6 |
| tripartite tricarboxylate transporter tcta | AO275_16690 | Not Available | Positive | 239305 - 240819 | 53112.0 |
| hypothetical protein | AO275_16695 | Not Available | Positive | 240812 - 241846 | 37271.8 |
| uracil-dna glycosylase | AO275_16700 | Not Available | Negative | 241851 - 242543 | 25853.9 |
| enoyl-coa hydratase | AO275_16705 | Not Available | Positive | 242712 - 243824 | 40912.2 |
| hypothetical protein | AO275_16710 | Not Available | Negative | 243898 - 244338 | 14927.9 |
| lipid kinase | AO275_16715 | Not Available | Positive | 245025 - 246098 | 38175.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
