Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | AO275_10260 | Not Available | Negative | 3584387 - 3585760 | 52456.4 |
| hypothetical protein | AO275_10265 | Not Available | Negative | 3586097 - 3587149 | 38475.2 |
| hypothetical protein | AO275_10270 | Not Available | Negative | 3588155 - 3588703 | 19664.5 |
| hypothetical protein | AO275_10275 | Not Available | Negative | 3589231 - 3589683 | 16851.4 |
| pyocin | AO275_10280 | Not Available | Negative | 3589680 - 3591212 | 54917.9 |
| transcriptional regulator | AO275_10285 | Not Available | Positive | 3591728 - 3592093 | 13898.9 |
| short-chain dehydrogenase | AO275_10290 | Not Available | Negative | 3592490 - 3593260 | 27505.9 |
| cupin | AO275_10295 | Not Available | Positive | 3593401 - 3593712 | 11411.5 |
| hypothetical protein | AO275_10300 | Not Available | Positive | 3594092 - 3594550 | 17146.7 |
| peptidase c1 | AO275_10305 | Not Available | Negative | 3594584 - 3595351 | 28695.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
