Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | AO275_10055 | Not Available | Positive | 3536478 - 3537206 | 25900.4 |
| 3-oxoacyl-acp synthase | AO275_10060 | Not Available | Positive | 3537206 - 3538432 | 43841.1 |
| lysr family transcriptional regulator | AO275_10065 | Not Available | Negative | 3538507 - 3539391 | 32293.2 |
| hypothetical protein | AO275_10070 | Not Available | Positive | 3539509 - 3540777 | 45015.2 |
| n-formimino-l-glutamate deiminase | AO275_10075 | Not Available | Negative | 3540885 - 3542249 | 49599.8 |
| histidine utilization repressor | AO275_10080 | Not Available | Positive | 3542390 - 3543139 | 27763.4 |
| hypothetical protein | AO275_10085 | Not Available | Positive | 3543136 - 3543753 | 22252.5 |
| sodium:proton antiporter | AO275_10090 | Not Available | Positive | 3543781 - 3544956 | 40992.4 |
| hypothetical protein | AO275_10095 | Not Available | Positive | 3545062 - 3545595 | 18491.2 |
| rna polymerase subunit sigma | AO275_10100 | Not Available | Positive | 3545695 - 3546261 | 21384.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
