Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | AO275_10005 | Not Available | Positive | 3526318 - 3527865 | 56072.3 |
| thioesterase | AO275_10010 | Not Available | Positive | 3527855 - 3528280 | 16253.7 |
| hypothetical protein | AO275_10015 | Not Available | Positive | 3528277 - 3528891 | 22641.3 |
| hypothetical protein | AO275_10020 | Not Available | Positive | 3528875 - 3531223 | 84218.5 |
| sodium:proton antiporter | AO275_10025 | Not Available | Positive | 3531220 - 3532392 | 43035.5 |
| fad-dependent oxidoreductase | AO275_10030 | Not Available | Positive | 3532379 - 3533626 | 46018.4 |
| methyltransferase | AO275_10035 | Not Available | Positive | 3533623 - 3534357 | 27761.2 |
| hypothetical protein | AO275_10040 | Not Available | Positive | 3534354 - 3534836 | 18314.3 |
| 3-oxoacyl-acp synthase | AO275_10045 | Not Available | Positive | 3534833 - 3536029 | 41496.2 |
| 3-hydroxylacyl-acp dehydratase | AO275_10050 | Not Available | Positive | 3536026 - 3536481 | 16285.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
