Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate decarboxylase subunit alpha | AO275_09950 | Not Available | Negative | 3517028 - 3518704 | 61446.9 |
| cobalamin biosynthesis protein cobq | AO275_09960 | Not Available | Negative | 3519299 - 3520078 | 29124.9 |
| 3-oxoacyl-acp synthase | AO275_09965 | Not Available | Positive | 3520425 - 3521144 | 26897.8 |
| acyltransferase | AO275_09970 | Not Available | Positive | 3521120 - 3521932 | 30049.6 |
| acyl carrier protein | AO275_09975 | Not Available | Positive | 3521907 - 3522167 | 9333.1 |
| acyl carrier protein | AO275_09980 | Not Available | Positive | 3522177 - 3522431 | 9648.51 |
| hypothetical protein | AO275_09985 | Not Available | Positive | 3522428 - 3522973 | 20076.4 |
| amp-binding protein | AO275_09990 | Not Available | Positive | 3522984 - 3524666 | 62048.9 |
| glycosyl transferase | AO275_09995 | Not Available | Positive | 3524659 - 3525393 | 27886.0 |
| glycosyl transferase | AO275_10000 | Not Available | Positive | 3525390 - 3526337 | 36305.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
