Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii | AO275_09900 | Not Available | Negative | 3509654 - 3510268 | 22661.6 |
| lysr family transcriptional regulator | AO275_09905 | Not Available | Positive | 3510424 - 3511353 | 34768.3 |
| malonate transporter | AO275_09910 | Not Available | Negative | 3511399 - 3512163 | 25578.0 |
| malonate transporter | AO275_09915 | Not Available | Negative | 3512170 - 3512565 | 13414.1 |
| malonate decarboxylase subunit epsilon | AO275_09920 | Not Available | Negative | 3512638 - 3513570 | 32918.6 |
| phosphoribosyl-dephospho-coa transferase | AO275_09925 | Not Available | Negative | 3513567 - 3514154 | 21105.5 |
| biotin-independent malonate decarboxylase subunit gamma | AO275_09930 | Not Available | Negative | 3514199 - 3514999 | 28233.8 |
| biotin-independent malonate decarboxylase subunit beta | AO275_09935 | Not Available | Negative | 3514996 - 3515847 | 29919.8 |
| malonate decarboxylase acyl carrier protein | AO275_09940 | Not Available | Negative | 3515840 - 3516139 | 10703.8 |
| triphosphoribosyl-dephospho-coa synthase mdcb | AO275_09945 | Not Available | Negative | 3516141 - 3517028 | 30869.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
