Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | AO275_09850 | Not Available | Positive | 3498050 - 3499459 | 51393.8 |
| 5,10-methylenetetrahydrofolate reductase | AO275_09855 | Not Available | Positive | 3499654 - 3500499 | 31391.1 |
| dead/deah box helicase | AO275_09860 | Not Available | Positive | 3500811 - 3502706 | 68256.2 |
| hypothetical protein | AO275_09865 | Not Available | Negative | 3503045 - 3503623 | 20575.3 |
| cytochrome b | AO275_09870 | Not Available | Negative | 3503651 - 3504199 | 20118.1 |
| amine oxidase | AO275_09875 | Not Available | Negative | 3504581 - 3506443 | 66777.9 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | AO275_09880 | Not Available | Positive | 3506654 - 3508060 | 52729.2 |
| 16s rrna methyltransferase | AO275_09885 | Not Available | Positive | 3508135 - 3508854 | 26531.9 |
| fis family transcriptional regulator | AO275_09890 | Not Available | Negative | 3508901 - 3509203 | 11046.2 |
| hypothetical protein | AO275_09895 | Not Available | Negative | 3509200 - 3509556 | 13320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
