Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | AO275_09800 | Not Available | Negative | 3487313 - 3488236 | 34704.6 |
| sugar abc transporter substrate-binding protein | AO275_09805 | Not Available | Positive | 3488551 - 3489858 | 48052.3 |
| sorbitol dehydrogenase | AO275_09810 | Not Available | Positive | 3489893 - 3490666 | 27220.6 |
| cytochrome c | AO275_09815 | Not Available | Positive | 3490772 - 3491593 | 29321.4 |
| 3-hydroxyisobutyrate dehydrogenase | AO275_09820 | Not Available | Positive | 3491876 - 3492781 | 31040.5 |
| hypothetical protein | AO275_09825 | Not Available | Positive | 3492792 - 3494081 | 44544.3 |
| aldolase | AO275_09830 | Not Available | Positive | 3494081 - 3494719 | 23266.0 |
| transporter | AO275_09835 | Not Available | Positive | 3494882 - 3496339 | 50429.1 |
| hydroxypyruvate isomerase | AO275_09840 | Not Available | Positive | 3496362 - 3497144 | 29142.5 |
| thioesterase | AO275_09845 | Not Available | Negative | 3497243 - 3497638 | 14883.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
