Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_09700 | Not Available | Negative | 3464252 - 3464485 | 8412.09 |
| phosphoglycerate kinase | AO275_09705 | Not Available | Negative | 3464514 - 3465677 | 40324.5 |
| glyceraldehyde-3-phosphate dehydrogenase | AO275_09710 | Not Available | Negative | 3465694 - 3466743 | 38489.8 |
| transketolase | AO275_09715 | Not Available | Negative | 3466877 - 3468874 | 72352.4 |
| arsr family transcriptional regulator | AO275_09720 | Not Available | Positive | 3469133 - 3470128 | 36140.4 |
| s-adenosylmethionine synthetase | AO275_09725 | Not Available | Positive | 3470149 - 3471339 | 42585.6 |
| toxin chpb | AO275_09730 | Not Available | Negative | 3471427 - 3471774 | 12309.8 |
| pbsx family transcriptional regulator | AO275_09735 | Not Available | Negative | 3471771 - 3472025 | 9307.24 |
| aromatic ring-opening dioxygenase liga | AO275_09740 | Not Available | Positive | 3472271 - 3473953 | 61597.6 |
| hypothetical protein | AO275_09745 | Not Available | Positive | 3474008 - 3474415 | 15097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
