Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO275_09440 | Not Available | Negative | 3405262 - 3406131 | 30241.7 |
| abc transporter substrate-binding protein | AO275_09445 | Not Available | Negative | 3406131 - 3407132 | 35662.7 |
| gntr family transcriptional regulator | AO275_09450 | Not Available | Negative | 3407116 - 3408135 | 36894.4 |
| serine/threonine protein kinase | AO275_09455 | Not Available | Positive | 3408332 - 3409306 | 37112.3 |
| chloramphenical resistance permease rard | AO275_09460 | Not Available | Positive | 3409544 - 3410431 | 32770.0 |
| glycine cleavage system protein r | AO275_09465 | Not Available | Negative | 3410645 - 3411172 | 18997.0 |
| malate synthase g | AO275_09470 | Not Available | Positive | 3411484 - 3413661 | 78970.0 |
| response regulator | AO275_09475 | Not Available | Negative | 3413846 - 3414289 | 16411.8 |
| cyclic nucleotide-binding protein | AO275_09480 | Not Available | Positive | 3414520 - 3416454 | 72298.7 |
| dna polymerase iii subunit epsilon | AO275_09485 | Not Available | Positive | 3416468 - 3417181 | 26783.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
