Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | AO275_09390 | Not Available | Negative | 3394999 - 3395808 | 29464.2 |
| transporter | AO275_09395 | Not Available | Negative | 3395801 - 3396544 | 26554.6 |
| 8-amino-7-oxononanoate synthase | AO275_09400 | Not Available | Negative | 3396537 - 3397727 | 42806.6 |
| biotin synthase | AO275_09405 | Not Available | Negative | 3397748 - 3398806 | 38554.2 |
| amidophosphoribosyltransferase | AO275_09410 | Not Available | Positive | 3398898 - 3399632 | 27798.8 |
| mode family transcriptional regulator | AO275_09415 | Not Available | Positive | 3399765 - 3400529 | 27634.2 |
| transcriptional initiation protein tat | AO275_09420 | Not Available | Positive | 3400610 - 3402511 | 69213.1 |
| metallophosphatase | AO275_09425 | Not Available | Negative | 3402584 - 3403417 | 31212.4 |
| iron abc transporter substrate-binding protein | AO275_09430 | Not Available | Negative | 3403443 - 3404474 | 37027.8 |
| abc transporter permease | AO275_09435 | Not Available | Negative | 3404471 - 3405265 | 28854.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
